Being Danil Krivoruchko | United States America (US)

Create: 2024-02-04 Update: 2024-05-21 15:12:11

В рамках возврата знаний обратно в комьюнити - если надумаете делать что-то со сканами, то вот что получилось насобирать коллективными усилиями:

- много сканов в nrrd формате, есть поиск (нужна регистрация, но это за 2 минуты делается)
https://www.embodi3d.com/files/category/15-democratiz3d%C2%AE-processing/?filter=file_free

- картинки срезов и кт/мрт в хорошем разрешении из Visible Human Project (это где пару людей заморозили и порезали на саб-миллиметровые слайсы)
https://data.lhncbc.nlm.nih.gov/public/Visible-Human/Male-Images/index.html

- чтобы экспортнуть срезы в секвенцию картинок из nrrd есть к примеру вот такой софт
https://www.slicer.org/

- но так как он очень медицинский о UX там скажем так не сильно задумывались, экспорт в картинки не делается в один клик, как я наивно предполагал 😅 вот ГАЙД ПО МОДУЛЮ ЭКСПОРТА
https://discourse.slicer.org/t/the-sequence-module/16490
https://slicer.readthedocs.io/en/5.6/user_guide/modules/screencapture.html

- nrrd можно затянуть напрямую в гудини как вольюм с помощью этого гита
https://github.com/TresSims/HoudiniFileInterpreters?tab=readme-ov-file

- но там в начале кода ошибка, которая бесконечно запускает новые инстансы гудини. надо ручками поставить библиотеку из ссылки ниже и в скрипте в начале исправить "import pynrrd" на "import nrrd"
https://pypi.org/project/pynrrd/

- или можно затянуть в гудини слайсы одной нодой - внутри объекта ставишь cop2net с Method в Volume, а внутри него обычной File нодой загружаешь секвенцию слайсов - все, у вас есть вольюм с содержимым 😍

Being Danil Krivoruchko

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В рамках возврата знаний обратно в комьюнити - если надумаете делать что-то со сканами

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